We construct four different structural networks for both the secondary and tertiary structures of the 16S and 23S ribosomal RNAs (rRNAs) in the high-resolution crystal structures of the Thermus thermophilus 30S and Haloarcula marismortui 50S ribosomal subunits, and investigate topological...

We propose a coevolutionary version to investigate the naming game, a model recently introduced to describe how shared vocabulary can emerge and persist spontaneously in communication systems. We base our model on the fact that more popular names have more opportunities to be selected by agents...

The spatial price problem means that if the supply price plus the transportation cost is less than the demand price, there exists a trade. Thus, after an amount of exchange, the demand price will decrease. This process is continuous until an equilibrium state is obtained. However, how the trade...

The realization that statistical physics methods can be applied to analyze written texts represented as complex networks has led to several developments in natural language processing, including automatic summarization and evaluation of machine translation. Most importantly, so far only a few...

The classification of texts has become a major endeavor with so much electronic material available, for it is an essential task in several applications, including search engines and information retrieval. There are different ways to define similarity for grouping similar texts into clusters, as...

The database of microRNAs and their predicted target genes in humans were used to extract a microRNA co-target network. Based on the finding that more than two miRNAs can target the same gene, we constructed a microRNA co-target network and analyzed it from the perspective of the complex...

The susceptible–infected–susceptible (SIS) model is widely adopted in the studies of epidemic dynamics. When it is applied on contact networks, these networks mostly consist of nodes connected by undirected and unweighted edges following certain statistical properties, whereas in this...

We investigate collective behaviors of coupled phase oscillators on an extended network model which can develop two fundamentally different topologies, scale-free or exponential. Each component of the network is assumed as an oscillator and that each interacts with the others following the...

In this paper, a model of ultimatum game is discussed from the coevolutionary perspective, where strategy dynamics and structure dynamics coexist. The interplay between structure dynamics and strategy dynamics leads to overwhelmingly interesting evolved topology and fairness behaviors. It is...

In this paper, we investigate how activity of complex neural networks depends on random long-range connections. Network elements are described by Hindmarsh–Rose (HR) neurons assumed to be inactive. It is found that for a given coupling strength, when the number of random connections (or...